| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arnhem Coast to Gulf of Carpenteria | Sea/Bay/Gulf | native | 121705 |
| Bonaparte Coast | Sea/Bay/Gulf | native | 121705 |
| Central and Southern Great Barrier Reef | Sea/Bay/Gulf | native | 121705 |
| Indian Ocean | Sea/Bay/Gulf | native | 2992 |
| Pacific Ocean | Sea/Bay/Gulf | native | 2992 |
| Temperate Northern Pacific | sea/bay/gulf | native | 116581 |
| Torres Strait Northern Great Barrier Reef | Sea/Bay/Gulf | native | 121705 |
| Western Indo-Pacific | sea/bay/gulf | native | 2992 |