| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Arnhem Coast to Gulf of Carpenteria | Sea/Bay/Gulf | native | 96968 |
| Bonaparte Coast | Sea/Bay/Gulf | native | 96968 |
| Central and Southern Great Barrier Reef | Sea/Bay/Gulf | native | 96968 |
| Exmouth to Broome | Sea/Bay/Gulf | native | 96968 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 96968 |
| Indian Ocean | Sea/Bay/Gulf | native | 96968 |
| Ningaloo | Sea/Bay/Gulf | native | 96968 |
| Pacific Ocean | Sea/Bay/Gulf | native | 96968 |
| Torres Strait Northern Great Barrier Reef | Sea/Bay/Gulf | native | 96968 |