| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Bohol Sea | Sea/Bay/Gulf | native | 8319 |
| Camotes Sea | Sea/Bay/Gulf | native | 8319 |
| Central Indo-Pacific | sea/bay/gulf | native | 75725 |
| Indonesian Sea | Sea/Bay/Gulf | native | 75725 |
| Marquesas | Sea/Bay/Gulf | native | 87883 |
| New Caledonia | Sea/Bay/Gulf | native | 99637 |
| Northeast Sulawesi | Sea/Bay/Gulf | native | 75725 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3116 |
| Papua | Sea/Bay/Gulf | native | 75725 |
| Polynesian Waters | Sea/Bay/Gulf | native | 87883 |
| Samar Sea | Sea/Bay/Gulf | native | 821 |
| Society Islands | Sea/Bay/Gulf | native | 87883 |
| South China Sea | Sea/Bay/Gulf | native | 77676 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 8319 |
| Tayabas Bay | Sea/Bay/Gulf | native | 8319 |
| Tropical Northwestern Pacific | sea/bay/gulf | native | 3116 |
| Tropical Southwestern Pacific | sea/bay/gulf | native | 99637 |
| Tuamotus | Sea/Bay/Gulf | native | 87883 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 121724 |
| West Philippine Sea | Sea/Bay/Gulf | native | 77676 |
| Western Coral Triangle | sea/bay/gulf | native | 75725 |